PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT2G17525.1   Pentatricopeptide repeat (PPR) superfamily protein

Lab Annot. Pentatricopeptide repeat (PPR) protein
Mapman: 27.6* RNA.pentatricopeptide (PPR) repeat-containing protein
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G74580.1 11Arabidopsis thaliana2E-6657628471 (1)_
AT1G74580.3 11Arabidopsis thaliana2E-6657628470 (0)_
AT1G74580.2 11Arabidopsis thaliana2E-6657628470 (0)_
Os03g40020.1 7Oryza sativa1E-5850526476 (6)C
Os01g57410.2 7Oryza sativa5E-5854125460 (0)C
Os01g57410.1 7Oryza sativa5E-5854125460 (0)C
Zm00001eb244190_P001 agpv5Zea mays2E-6357325460 (0)C
v1_GRMZM2G421231_P01 4a53Zea mays5E-6357325466 (6)C
GRMZM2G421231_P01 3.21Zea mays5E-63573254615 (15)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: AEP1(3) ATP13(5) ECSIT(4) MRP-S27(2) PPR(13) PPR_1(14) PPR_2(12) PPR_3(9) PPR_lo
TargetP: Mitochondria (Class 2 C0.241; M0.846; S0.035; _0.011)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 626 aa (-cTP 597)
Molecular Weight 70.34 kDA(-cTP )
PI 7.79(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help