PPDB

 The Plant Proteome Database

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AT2G17390.1   ankyrin repeat-containing 2B
Lab Annot. ankyrin repeat protein (AKR2B) - homologue chaperone OEP
Mapman: 27.3.39 RNA.regulation of transcription.AtSR Transcription Factor family
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G35450.1 11Arabidopsis thaliana03467987173 (114)C
AT4G35450.3 11Arabidopsis thaliana03467987173 (114)C
AT4G35450.2 11Arabidopsis thaliana03467987173 (114)C
Os09g33810.2 7Oryza sativa6E-141333627513 (13)_
Os09g33810.1 7Oryza sativa6E-140330627613 (13)C
Os09g33810.3 7Oryza sativa1E-124301617513 (13)_
GRMZM5G800734_P02 3.21Zea mays2E-14033962767 (7)C
Zm00001eb318200_P003 agpv5Zea mays2E-14033962760 (0)C
AC215244.3_FGP002 3.21Zea mays2E-13834961737 (7)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Acetyltransf_8(1) Ank(2) Ank_2(2) Ank_3(2) Ank_4(3) Ank_5(2) Com_YlbF(3) DnaI_N(
TargetP: Cytoplasm (Class 4 C0.513; M0.034; S0.075; _0.804)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 344 aa (-cTP 341)
Molecular Weight 36.90 kDA(-cTP )
PI 4.37(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
351Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
451Detail       leaf [A. thaliana] total leaf tissue clpr4-1
1127Detail       leaf [A. thaliana] chloroplast plastoglobulek2k3
1350Detail       leaf [A. thaliana] total tissue (5 day HL) abck2xabck3 (rep. 3)
1407Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. clpr2-1
1409Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 1.1 wild-type
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
1418Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 3)
2246Detail       seedlings [A. thaliana] total tissue gfs9
2248Detail       seedlings [A. thaliana] total tissue wild-type
2249Detail       seedlings [A. thaliana] total tissue gfs9
2250Detail       seedlings [A. thaliana] total tissue atg5
2251Detail       seedlings [A. thaliana] total tissue wild-type
2252Detail       seedlings [A. thaliana] total tissue gfs9
2253Detail       seedlings [A. thaliana] total tissue atg5

* For details about the exprimental sources click here.

Published Proteomics Data

 17317660(Plasma Membrane proteome)
17407188(cotyledon)
19200160(flower-stage 12)
19546170(mature pollen grains)
19429840(ubiquitinated or associated with ubiquitinated proteins (seedlings))
19525416(leaf (wt and clpr4-1 mutant))
19888209(leaves)
19114538(guard cells Arabidopsis leaf)
20733066(phosphoproteome-ABA-leaf)
21173025(root proteome)
21515685(GreenCut2)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help