PPDB

 The Plant Proteome Database

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AT2G17380.1   associated protein 19
Lab Annot. associated protein 19
Mapman: 31.4 cell.vesicle transport
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G35410.2 11Arabidopsis thaliana4E-11416097981 (1)M
AT4G35410.1 11Arabidopsis thaliana2E-679895970 (0)M
AT1G47830.1 11Arabidopsis thaliana3E-5214153735 (5)M
Os03g57040.2 7Oryza sativa3E-107161889629 (29)M
Os03g57040.1 7Oryza sativa5E-106160889625 (25)S
Os03g59660.1 7Oryza sativa1E-9916180920 (0)M
Zm00001eb059770_P002 agpv5Zea mays7E-10816190960 (0)M
Zm00001eb059770_P003 agpv5Zea mays7E-10816190960 (0)M
v1_GRMZM2G361220_P03 4a53Zea mays7E-108161909635 (35)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Clat_adaptor_s(1)
TargetP: Mitochondria (Class 2 C0.043; M0.863; S0.009; _0.262)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 161 aa (-cTP 155)
Molecular Weight 18.76 kDA(-cTP )
PI 6.90(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
324Detail       leaf [A. thaliana] cell wall enriched wild-type
1395Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 1)
1403Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
2010Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1
2011Detail       leaf [A. thaliana] total leaf tissue opda1-2
2013Detail       leaf [A. thaliana] total leaf tissue wt
2014Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1
2015Detail       leaf [A. thaliana] total leaf tissue opda1-2
2016Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1xopda1-2
2017Detail       leaf [A. thaliana] total leaf tissue wild-type
2018Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1
2020Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1xopda1-2
2248Detail       seedlings [A. thaliana] total tissue wild-type
2249Detail       seedlings [A. thaliana] total tissue gfs9
2250Detail       seedlings [A. thaliana] total tissue atg5
2307Detail        [A. thaliana] Clp C1 TRAP

* For details about the exprimental sources click here.

Published Proteomics Data

 19546170(mature pollen grains)
21173025(root proteome)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help