PPDB

The Plant Proteome Database

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AT2G17360.2   Ribosomal protein S4 (RPS4A) family protein

Lab Annot. 40S ribosomal protein S4 (RPS4A)
Mapman: 29.2.1.2.1.4 protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S4
Curated Location cytosol
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links PeptideAtlas   POGS   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G07090.1 11Arabidopsis thaliana1E-1311819898380 (255)M
AT2G17360.1 11Arabidopsis thaliana2E-1311819898379 (254)M
AT5G58420.1 11Arabidopsis thaliana9E-1311819898228 (152)M
Os01g25610.1 7Oryza sativa8E-123181919636 (36)M
Os02g01560.1 7Oryza sativa2E-122181909656 (56)M
Os05g30530.1 7Oryza sativa2E-121181909517 (17)M
Zm00001eb211010_P001 agpv5Zea mays2E-12318191960 (0)M
GRMZM2G125271_P01 3.21Zea mays2E-1231819196114 (104)M
v1_GRMZM2G125271_P01 4a53Zea mays8E-1231819196115 (115)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: dCache_2(1) Ribosomal_S4e(1) RS4NT(1) S4(2)
TargetP: Mitochondria (Class 4 C0.184; M0.576; S0.009; _0.342)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 184 aa (-cTP 130)
Molecular Weight 21.41 kDA(-cTP )
PI 9.98(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1402Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 wild-type
1507Detail        [A. thaliana] wild-type
1532Detail       leaf [A. thaliana] total leaf tissue - 0 uM CAP clps (rep. 1)
1538Detail       leaf [A. thaliana] plastid RNCs thylakoid membranewild-type
1757Detail       leaf [A. thaliana] total leaf tissue DXS_Flag
1931Detail       leaf [A. thaliana] total leaf tissue DXS_Flag
1932Detail       leaf [A. thaliana] total leaf tissue DXS_Flag
2210Detail       leaf [A. thaliana] total leaf tissue Clp P5 strepII st28
2324Detail       leaf [A. thaliana] THYLAKOIDS thylakoid membrane 

* For details about the exprimental sources click here.

Published Proteomics Data

21533090(plasmodesmata-crude)
21325567(root-proteome (wt & det3))
21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)
21173025(root proteome)
22430844(Golgi-cell-culture)
21433285(purified Plasma membrane -cell_cultures)

Comparative Proteomics Data


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