PPDB

The Plant Proteome Database

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AT2G17240.1   arginine/serine-rich-like splicing factor

Lab Annot. CONSERVED ONLY IN THE GREEN LINEAGE20 A (CGL20A)
Mapman: 29.2.7* protein.synthesis.ribosome biogenesis
Curated Location plastid stroma (Pubmed: 3193783 )
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G24506.1 11Arabidopsis thaliana2E-266882911 (0)C
Os02g40040.1 7Oryza sativa6E-199460750 (0)C
Zm00001eb247070_P001 agpv5Zea mays4E-267466770 (0)C
v1_GRMZM2G094831_P01 4a53Zea mays4E-267466770 (0)C
GRMZM2G094831_P01 3.21Zea mays4E-267466770 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM:
TargetP: Chloroplast (Class 1 C0.961; M0.027; S0.007; _0.055)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 140 aa (-cTP 81)
Molecular Weight 16.19 kDA(-cTP 9.76)
PI 4.87(-cTP 4.29)

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2145Detail       Total leaf [A. thaliana] total soluble stromawt & cgep
2146Detail       Total leaf [A. thaliana] total soluble stromawt & cgep
2147Detail       Total leaf [A. thaliana] total soluble stromawt & cgep

* For details about the exprimental sources click here.

Published Proteomics Data

21173025(root proteome)
21515685(GreenCut2)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help