PPDB

PPDB	The Plant Proteome Database

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AT2G17190.1 ubiquitin family protein

Lab Annot.

ubiquitin protein
Mapman: 29.5.11.1 protein.degradation.ubiquitin.ubiquitin

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT2G17200.1 11 Arabidopsis thaliana 0 555 87 90 20 (8) _
AT5G42220.1 11 Arabidopsis thaliana 1E-11 106 35 54 4 (4) _
AT5G42220.2 11 Arabidopsis thaliana 1E-11 106 35 54 0 (0) _
Os10g39620.2 7 Oryza sativa 2E-180 559 57 69 5 (5) _
Os03g03920.1 7 Oryza sativa 1E-175 528 56 70 1 (1) _
Os10g39620.1 7 Oryza sativa 1E-167 543 56 68 5 (5) _
Zm00001eb402540_P002 agpv5 Zea mays 0 529 57 70 0 (0) _
Zm00001eb402540_P003 agpv5 Zea mays 0 529 57 70 0 (0) _
Zm00001eb402540_P001 agpv5 Zea mays 0 529 57 70 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	CSTF2_hinge(2) CUE(1) DUF1400(2) DUF2407(1) GerD(4) HOIP-UBA(1) Mod_r(3) Rad60-S
TargetP:	Cytoplasm (Class 2 C0.136; M0.100; S0.110; _0.797)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	538 aa (-cTP 515)
Molecular Weight	57.28 kDA(-cTP )
PI	4.69(-cTP )

Experimental Evidence

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* For details about the exprimental sources click here.

Published Proteomics Data

19200160(flower-stage 12)
19546170(mature pollen grains)
21166475(cytosolic-fractions-crude)
21173025(root proteome)

Comparative Proteomics Data