|
AT2G17120.1
lysm domain GPI-anchored protein 2 precursor
|
| Lab Annot. |
LYM2 (LYSM DOMAIN GPI-ANCHORED PROTEIN 2 PRECURSOR)
Mapman: 35.1 not assigned.no ontology |
| Curated Location |
plasma membrane
TAIR curated location: anchored to membrane12068095,12805588 |
| Species |
Arabidopsis thaliana
Source:
TAIR Arabidopsis (v.11) |
| Links |
TAIR PeptideAtlas POGS SUBA Uniprot PTM
Get sequence
|
Related Genes
|
#Spots: The number of publicly accessible spots are in parenthesis
|
| Prediction |
| PFAM: |
LysM(3) |
| TargetP: |
Secreted (Class 2 C0.040; M0.006; S0.828; _0.012) |
| Predotar: |
|
| Subcel. Location: |
|
| TM-HMM prediction: |
1 TMs |
| Aramemnon: |
|
| TAT position: |
|
| Length |
350 aa (-cTP 302) |
| Molecular Weight |
37.74 kDA(-cTP ) |
| PI |
5.93(-cTP ) |
|
|
Experimental Evidence
Expand
View Identified Peptides
View GeneModel
|
| Expr* | Spot | MW native | MW denatured | pI native | pI denatured | Type | Mowse | Ambiguity | Tissue | Sample from | Genotype |
| 361 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue 1.07 | wild-type |
| 371 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | clpr4-1 |
| 451 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | clpr4-1 |
| 527 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | wild-type (wt1) |
| 528 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | wild-type (wt2) |
| 1207 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | clpp3 null |
| 1208 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | clpp3 null |
| 1349 | Detail | | | | | | | | leaf [A. thaliana] | total tissue (5 day HL) | abck2xabck3 (rep. 2) |
| 1395 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | wild-type (rep. 1) |
| 1401 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue 1.14 -rep. 1 | clpp3-1 |
| 1403 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue 1.14 -rep. 1 | clpp3-1 |
| 2005 | Detail | | | | | | | | leaf [A. thaliana] | RNAi PG plastoglobule | RNAi |
| 2006 | Detail | | | | | | | | leaf [A. thaliana] | over expressed M48 plastoglobule | M48 |
| 2008 | Detail | | | | | | | | leaf [A. thaliana] | RNAi PG plastoglobule | RNAi |
| 2017 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | wild-type |
| 2245 | Detail | | | | | | | | seedlings [A. thaliana] | total tissue | wild-type |
| 2246 | Detail | | | | | | | | seedlings [A. thaliana] | total tissue | gfs9 |
| 2251 | Detail | | | | | | | | seedlings [A. thaliana] | total tissue | wild-type |
| 2252 | Detail | | | | | | | | seedlings [A. thaliana] | total tissue | gfs9 |
| 2400 | Detail | | | | | | | | leaf-soluble [A. thaliana] | GFP-nano-trap | wt/DUF760-1GFP/ClpC1TRAPSTREP |
* For details about the exprimental sources
click here.
|
|
Published Proteomics Data
|
12805588(GBI-anchored-callus)
14517339(GPI anchored suspension cells)
16602701(GPI-anchored Plasma membrane suspension cells)
17317660(Plasma Membrane proteome)
17644812(plasma membrane - suspension cells)
18796151(cell wall (hypocotyl))
19036721(sterol dependent detergent resistant plasma membrane (DRM) proteins (Cell cultures))
19036721(detergent resistant plasma membrane (DRM) proteins (Cell cultures))
19260003(detergent resistant plasma membrane (DRM) proteins (Cell cultures))
19334764(plasma membrane (cell culture))
20166762(guard cells (Arabidopsis))
WallDB-E.Jamet(cell wall reference proteome)
21533090(plasmodesmata-crude)
20843791(DRM-enriched plasmamembrane)
21173025(root proteome)
21433285(Crude microsomes cell_cultures)
21433285(purified Plasma membrane -cell_cultures)
21109274(cellwall-glycoproteome)
|
|
Comparative Proteomics Data
|
|
