PPDB

The Plant Proteome Database

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AT2G16940.2   Splicing factor%2C CC1-like protein

Lab Annot. Splicing factor, CC1-like
Mapman: 35.1 not assigned.no ontology
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links PeptideAtlas   POGS   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G16940.1 11Arabidopsis thaliana061091912 (0)_
AT2G16940.3 11Arabidopsis thaliana061991922 (0)_
AT2G16940.5 11Arabidopsis thaliana040698990 (0)_
Os03g05830.1 7Oryza sativa4E-15843562710 (0)_
Os10g30370.1 7Oryza sativa4E-13235362752 (2)_
Os10g30370.2 7Oryza sativa1E-11933462742 (2)_
Zm00001eb403170_P003 agpv5Zea mays3E-16939567770 (0)_
v1_AC233901.1_FGP001 4a53Zea mays6E-16641862730 (0)_
Zm00001eb222690_P005 agpv5Zea mays8E-16338865770 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF1866(3) LAP1C(1) RBM39linker(1) RRM_1(3) RRM_7(2)
TargetP: Cytoplasm (Class 2 C0.246; M0.062; S0.029; _0.885)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 610 aa (-cTP 545)
Molecular Weight 68.97 kDA(-cTP )
PI 6.59(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)
21173025(root proteome)

Comparative Proteomics Data


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