PPDB

PPDB	The Plant Proteome Database

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AT2G16940.1 Splicing factor%2C CC1-like protein

Lab Annot.

Splicing factor, CC1-like
Mapman: 35.1 not assigned.no ontology

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT2G16940.2 11 Arabidopsis thaliana 0 610 91 91 2 (0) _
AT2G16940.3 11 Arabidopsis thaliana 0 599 93 93 2 (0) _
AT2G16940.5 11 Arabidopsis thaliana 0 401 100 100 0 (0) _
Os03g05830.1 7 Oryza sativa 2E-159 435 62 71 0 (0) _
Os10g30370.1 7 Oryza sativa 4E-133 352 63 75 2 (2) _
Os10g30370.2 7 Oryza sativa 2E-120 333 62 74 2 (2) _
Zm00001eb222690_P005 agpv5 Zea mays 0 579 54 66 0 (0) _
v1_GRMZM2G071589_P02 4a53 Zea mays 0 579 54 66 1 (1) _
v1_GRMZM2G071589_P01 4a53 Zea mays 0 579 54 66 1 (1) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DUF1866(3) RBM39linker(1) RRM_1(3) RRM_7(2)
TargetP:	Cytoplasm (Class 2 C0.246; M0.062; S0.029; _0.885)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	561 aa (-cTP 496)
Molecular Weight	63.10 kDA(-cTP )
PI	6.39(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

18463617(suspension cells-phosphorylated proteins)
19253305(phosphoproteins (etiolated seedling))
19376835(leaf phosphoproteins)
19114538(guard cells Arabidopsis leaf)
21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)
21173025(root proteome)

Comparative Proteomics Data