PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT2G16920.1   ubiquitin-conjugating enzyme 23

Lab Annot. ubiquitin-conjugating enzyme 23
Mapman: 29.5.11 protein.degradation.ubiquitin
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G16920.2 11Arabidopsis thaliana011021001000 (0)_
AT2G33770.1 11Arabidopsis thaliana2E-14166541560 (0)_
AT1G53025.1 11Arabidopsis thaliana5E-8726952670 (0)_
Os01g03520.1 7Oryza sativa0110349637 (7)_
Os05g48390.1 7Oryza sativa9E-11965839540 (0)_
Os05g48380.1 7Oryza sativa7E-9230150640 (0)_
Zm00001eb125670_P002 agpv5Zea mays0110649640 (0)_
Zm00001eb125670_P001 agpv5Zea mays0110649640 (0)_
Zm00001eb334990_P001 agpv5Zea mays086543610 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: UQ_con(1)
TargetP: Cytoplasm (Class 2 C0.182; M0.103; S0.092; _0.890)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 1102 aa (-cTP 1072)
Molecular Weight 122.18 kDA(-cTP )
PI 4.58(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

18463617(suspension cells-phosphorylated proteins)
19546170(mature pollen grains)
19245862(nuclear phosphoproteins (seedlings & cell culture))
21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help