PPDB

PPDB	The Plant Proteome Database

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AT2G16850.1 plasma membrane intrinsic protein 2%3B8

Lab Annot.

PIP2;8/PIP3B (plasma membrane intrinsic protein 2;8); water channel
Mapman: 34.19.1 transport.Major Intrinsic Proteins.PIP

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT4G35100.1 11 Arabidopsis thaliana 0 280 91 94 654 (574) _
AT4G35100.2 11 Arabidopsis thaliana 0 280 91 94 592 (512) _
AT3G53420.1 11 Arabidopsis thaliana 2E-159 283 78 85 609 (593) _
Os07g26690.1 7 Oryza sativa 1E-158 287 79 83 206 (206) _
Os02g41860.2 7 Oryza sativa 1E-155 288 75 83 128 (128) _
Os07g26660.1 7 Oryza sativa 6E-152 283 75 82 0 (0) _
Zm00001eb306380_P001 agpv5 Zea mays 3E-158 287 78 83 0 (0) _
GRMZM2G014914_P01 3.21 Zea mays 3E-158 287 78 83 180 (148) _
v1_GRMZM2G014914_P01 4a53 Zea mays 3E-158 287 78 83 163 (163) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	MIP(1)
TargetP:	Cytoplasm (Class 1 C0.017; M0.100; S0.098; _0.985)
Predotar:
Subcel. Location:
TM-HMM prediction:	6 TMs
Aramemnon:	6 TMs
TAT position:
Length	278 aa (-cTP 272)
Molecular Weight	29.50 kDA(-cTP )
PI	9.02(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
527	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (wt1)
1262	Detail								leaf [A. thaliana]	co-IP SHOOT1 (rep. 2) thylakoid membrane	wild-type
1345	Detail								leaf [A. thaliana]	total tissue (5 day HL)	wild-type (rep. 1)
1348	Detail								leaf [A. thaliana]	total tissue (5 day HL)	abck2xabck3 (rep. 1)
1349	Detail								leaf [A. thaliana]	total tissue (5 day HL)	abck2xabck3 (rep. 2)
1395	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (rep. 1)
1396	Detail								leaf [A. thaliana]	total leaf tissue	clpt1xclpt2 (rep. 2)
1424	Detail								leaf [A. thaliana]	total leaf tissue	prep1xprep2xt1xt2 (rep. 1)
1426	Detail								leaf [A. thaliana]	total leaf tissue	prep1xprep2xt1xt2 (rep. 3)
1440	Detail								leaf [A. thaliana]	total tissue (0 day HL)	wild-type (rep. 2)
1441	Detail								leaf [A. thaliana]	total tissue (0 day HL)	wild-type (rep. 3)
1443	Detail								leaf [A. thaliana]	total tissue (0 day HL)	abck2xabck3 (rep. 2)
1444	Detail								leaf [A. thaliana]	total tissue (0 day HL)	abck2xabck3 (rep. 3)
1448	Detail								leaf [A. thaliana]	total tissue (3 day HL)	abck2xabck3 (rep. 1)
1449	Detail								leaf [A. thaliana]	total tissue (3 day HL)	abck2xabck3 (rep. 2)
1529	Detail								leaf [A. thaliana]	total leaf tissue - 0 uM CAP	wild-type (rep. 1)
1613	Detail								Natural Senescence leaf [A. thaliana]
1614	Detail								Natural Senescence leaf [A. thaliana]
1615	Detail								Natural Senescence leaf [A. thaliana]
1828	Detail								leaf [A. thaliana]	Thylakoids thylakoid membrane	Col-0 Fluctuating light

* For details about the exprimental sources click here.

Published Proteomics Data

17432890(leaf total membranes)
17660356(tonoplast (Brassica oleracea buds))
18463617(suspension cells-phosphorylated proteins)
19334764(plasma membrane (cell culture))
19376835(leaf phosphoproteins)
20733066(phosphoproteome-ABA-leaf)
21768351(Leaf-Phosphoproteome)
21189294(nuclear pore complex (co-IPs RAE1,Nup43,50a,93a,136))

Comparative Proteomics Data