PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT2G16810.1   F-box and associated interaction domains-containing protein

Lab Annot. F-box and associated interaction domains-containing protein
Mapman: 29.5.11.4.3.2 protein.degradation.ubiquitin.E3.SCF.FBOX
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G40910.1 11Arabidopsis thaliana2E-7426350660 (0)_
AT2G40910.2 11Arabidopsis thaliana3E-7426350660 (0)M
AT2G40920.1 11Arabidopsis thaliana8E-7126047660 (0)_
Os09g27570.1 7Oryza sativa2E-1126025460 (0)_
Os09g27660.3 7Oryza sativa2E-1125826450 (0)M
Os09g27660.1 7Oryza sativa2E-1125826450 (0)M
GRMZM2G135002_P02 3.21Zea mays6E-0718630440 (0)_
Zm00001eb116670_P003 agpv5Zea mays6E-0718630440 (0)_
Zm00001eb116670_P001 agpv5Zea mays6E-0718630440 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: F-box(1) F-box-like(1) FBA_1(1) FBA_3(1)
TargetP: Cytoplasm (Class 5 C0.104; M0.376; S0.007; _0.452)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 295 aa (-cTP 267)
Molecular Weight 34.53 kDA(-cTP )
PI 9.93(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2269Detail       seedlings [A. thaliana] total tissue wild-type
2270Detail       seedlings [A. thaliana] total tissue wild-type
2271Detail       seedlings [A. thaliana] total tissue wild-type
2273Detail       seedlings [A. thaliana] total tissue wild-type
2274Detail       seedlings [A. thaliana] total tissue wild-type
2275Detail       seedlings [A. thaliana] total tissue wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help