PPDB

The Plant Proteome Database

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AT2G16800.1   high-affinity nickel-transport family protein

Lab Annot. high-affinity nickel-transport protein
Mapman: 34.12 transport.metal
Curated Location plastid (Pubmed: 23198870 )
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G35080.1 11Arabidopsis thaliana4E-15838069792 (2)C
AT4G35080.3 11Arabidopsis thaliana8E-15340465742 (2)C
AT4G35080.2 11Arabidopsis thaliana1E-13238063712 (2)C
Os06g02580.1 7Oryza sativa2E-13126173839 (9)C
Os03g06090.1 7Oryza sativa4E-11727965780 (0)M
Zm00001eb004310_P001 agpv5Zea mays4E-11828166780 (0)C
v1_GRMZM2G141636_P01 4a53Zea mays4E-118281667821 (21)C
GRMZM2G141636_P01 3.21Zea mays4E-118281667822 (22)C

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DsbD_2(2)
TargetP: Chloroplast (Class 1 C0.947; M0.117; S0.001; _0.041)
Predotar:
Subcel. Location: Transmembrane
TM-HMM prediction: 5 TMs
Aramemnon: 6 TMs
TAT position:
Length 372 aa (-cTP 294) (-lTP 242)
Molecular Weight 39.69 kDA(-cTP 30.98)(-lTP 25.52)
PI 9.64(-cTP 8.93)(-lTP 8.370)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

20061580(chloroplast envelope (inner+outer))
21515685(GreenCut2)

Comparative Proteomics Data


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