PPDB

The Plant Proteome Database

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AT2G16790.1   P-loop containing nucleoside triphosphate hydrolases superfamily protein

Lab Annot.
Mapman: 13.1.6.1.5 amino acid metabolism.synthesis.aromatic aa.chorismate.shikimate kinase
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G16790.5 11Arabidopsis thaliana1E-1391891001000 (0)_
AT2G16790.2 11Arabidopsis thaliana6E-13618998980 (0)_
AT2G16790.3 11Arabidopsis thaliana7E-1351831001000 (0)S
v1_GRMZM2G300258_P01 4a53Zea mays4E-5917946670 (0)S
Zm00001eb177740_P002 agpv5Zea mays4E-5917946670 (0)S
GRMZM2G300258_P01 3.21Zea mays4E-5917946670 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: AAA_14(1) AAA_16(1) AAA_17(1) AAA_18(1) AAA_22(1) AAA_24(1) AAA_29(1) AAA_33(1)
TargetP: Cytoplasm (Class 3 C0.039; M0.137; S0.277; _0.809)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 189 aa (-cTP 171)
Molecular Weight 20.97 kDA(-cTP )
PI 5.52(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2249Detail       seedlings [A. thaliana] total tissue gfs9

* For details about the exprimental sources click here.

Published Proteomics Data

18436743(specific to roots)
21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help