PPDB

PPDB	The Plant Proteome Database

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AT2G16780.1 Transducin family protein / WD-40 repeat family protein

Lab Annot.

Mapman: 33.99 development.unspecified

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT4G35050.1 11 Arabidopsis thaliana 0 398 85 93 0 (0) _
AT5G58230.1 11 Arabidopsis thaliana 8E-156 408 55 70 24 (3) _
AT2G19520.1 11 Arabidopsis thaliana 2E-66 448 32 49 67 (27) _
Os03g43890.1 7 Oryza sativa 4E-151 408 53 68 2 (2) _
Os09g36900.1 7 Oryza sativa 5E-136 400 53 67 4 (4) _
Os01g51300.2 7 Oryza sativa 4E-57 444 30 47 16 (16) _
Zm00001eb050680_P002 agpv5 Zea mays 3E-150 407 53 69 0 (0) _
GRMZM2G090217_P03 3.21 Zea mays 3E-150 407 53 69 14 (0) _
v1_GRMZM2G090217_P01 4a53 Zea mays 3E-150 407 53 69 11 (11) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	ANAPC4_WD40(3) CAF1C_H4-bd(2) Cytochrom_D1(3) DUF2415(2) WD40(5)
TargetP:	Cytoplasm (Class 1 C0.104; M0.057; S0.022; _0.953)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	415 aa (-cTP 334)
Molecular Weight	46.70 kDA(-cTP )
PI	4.66(-cTP )

Experimental Evidence

Expand

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
621	Detail								leaf [A. thaliana]	total leaf tissue	clpr4-1

* For details about the exprimental sources click here.

Published Proteomics Data

21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)
21173025(root proteome)

Comparative Proteomics Data