PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT2G16710.1   Iron-sulfur cluster biosynthesis family protein

Lab Annot. scaffold Fe-S assembly?
Mapman: 29.8.1* protein assembly and cofactor ligation.Fe-S assembly
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G16710.3 11Arabidopsis thaliana2E-9714395951 (1)M
AT2G16710.2 11Arabidopsis thaliana1E-721041001001 (1)M
AT2G36260.1 11Arabidopsis thaliana5E-6111076900 (0)M
Os12g30030.1 7Oryza sativa1E-7112675880 (0)C
Os01g01610.1 7Oryza sativa2E-6611179910 (0)M
Os12g30030.2 7Oryza sativa6E-6615063740 (0)C
GRMZM2G154499_P02 3.21Zea mays2E-6610782930 (0)M
v1_GRMZM2G154499_P02 4a53Zea mays2E-6610782930 (0)M
v1_GRMZM2G163996_P01 4a53Zea mays2E-6510781920 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Fe-S_biosyn(1) Tme5_EGF_like(1)
TargetP: Mitochondria (Class 4 C0.343; M0.573; S0.042; _0.034)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 137 aa (-cTP 130)
Molecular Weight 14.99 kDA(-cTP )
PI 9.27(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2183Detail       Rosettes [A. thaliana] total soluble tic40 and wt

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help