PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT2G16595.1   Translocon-associated protein (TRAP)%2C alpha subunit

Lab Annot.
Mapman: 35.1 not assigned.no ontology
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G21160.1 11Arabidopsis thaliana5E-762385573133 (123)S
AT2G21160.2 11Arabidopsis thaliana1E-63164597549 (45)S
Os06g50154.1 7Oryza sativa1E-83238537112 (12)S
Zm00001eb272310_P003 agpv5Zea mays3E-7925550650 (0)S
Zm00001eb272310_P001 agpv5Zea mays3E-7925550650 (0)S
GRMZM2G065950_P01 3.21Zea mays3E-79255506522 (22)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: TRAP_alpha(1)
TargetP: Secreted (Class 1 C0.001; M0.141; S0.977; _0.013)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon: 1 TMs
TAT position:
Length 251 aa (-cTP 227)
Molecular Weight 27.41 kDA(-cTP )
PI 5.09(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help