PPDB

The Plant Proteome Database

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AT2G16460.1   coiled-coil 90B-like protein (DUF1640)

Lab Annot. unknown protein
Mapman: 35.2 not assigned.unknown
Curated Location not plastid (supported by in-house exprements)

TAIR curated location: mitochondrion14671022,12606038
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G16460.2 11Arabidopsis thaliana1E-120171989926 (26)M
AT3G51090.1 11Arabidopsis thaliana7E-10724367760 (0)_
AT3G51090.2 11Arabidopsis thaliana4E-7920463730 (0)_
Os06g49890.1 7Oryza sativa7E-117194829412 (12)M
GRMZM2G116427_P01 3.21Zea mays5E-116196829310 (10)M
v1_GRMZM2G116427_P01 4a53Zea mays5E-11619682934 (3)M
Zm00001eb272420_P001 agpv5Zea mays5E-11619682930 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: CortBP2(2) Dict-STAT-coil(2) DUF1640(1) DUF2730(2) DUF4156(1) DUF4407(1) Exonuc_
TargetP: Mitochondria (Class 2 C0.091; M0.877; S0.018; _0.011)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 230 aa (-cTP 184)
Molecular Weight 25.79 kDA(-cTP )
PI 9.16(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
351Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
352Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
1346Detail       leaf [A. thaliana] total tissue (5 day HL) wild-type (rep. 2)
1348Detail       leaf [A. thaliana] total tissue (5 day HL) abck2xabck3 (rep. 1)
1349Detail       leaf [A. thaliana] total tissue (5 day HL) abck2xabck3 (rep. 2)
1401Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1403Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1404Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 wild-type
1405Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. wild-type
1407Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. clpr2-1
1409Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 1.1 wild-type
1410Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 1.2 wild-type
1411Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 1.1 clpr2-1
1412Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 1.2 clpr2-1
1413Detail       leaf [A. thaliana] total leaf tissue -114 rep1tR1 wild-type
1415Detail       leaf [A. thaliana] total leaf tissue 1.14 rep 1.1 clpr2-1
1416Detail       leaf [A. thaliana] total leaf tissue 1.14 rep 1.2 clpr2-1
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
1418Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 3)
1431Detail       leaf [A. thaliana] total tissue (2% sucrose) wild-type (rep. 2)
2009Detail       leaf [A. thaliana] total leaf tissue wild-type
2015Detail       leaf [A. thaliana] total leaf tissue opda1-2
2246Detail       seedlings [A. thaliana] total tissue gfs9
2248Detail       seedlings [A. thaliana] total tissue wild-type
2249Detail       seedlings [A. thaliana] total tissue gfs9
2250Detail       seedlings [A. thaliana] total tissue atg5
2251Detail       seedlings [A. thaliana] total tissue wild-type
2321Detail       leaf [A. thaliana]  

* For details about the exprimental sources click here.

Published Proteomics Data

MitoDB(Mitochondrial proteome)
15276431(Mitochondrial proteome)
16618929(MITO/PLASTID-LOPIT-callus)
15276431(mitochondrial membranes-suspension cells)
12606038(Mitochondria-metalbinding)
17151019(vacuole - suspension cell)
18931141(peroxisomes- high&low purity (cell culture))
19525416(leaf (wt and clpr4-1 mutant))
19334764(plasma membrane (cell culture))
21311031(mitochondria)
21841088(mitochondria (2DE native gel))
21173025(root proteome)
21472856(mitochondria-LC-MS/MS-uncurated)
21472856(mitochondrial-reference-proteome-Millar-Nov2011)

Comparative Proteomics Data


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