PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT2G16440.1   Minichromosome maintenance (MCM2/3/5) family protein

Lab Annot. DNA replication licensing factor
Mapman: 28.1.5* DNA.synthesis/chromatin structure.synthesis
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G44635.1 11Arabidopsis thaliana3E-11555538562 (1)_
AT5G44635.2 11Arabidopsis thaliana4E-11555538560 (0)_
AT4G02060.1 11Arabidopsis thaliana2E-10660737560 (0)_
Os01g36390.1 7Oryza sativa081469813 (3)C
Os12g37400.2 7Oryza sativa7E-11554241594 (4)_
Os12g37400.1 7Oryza sativa7E-11454241594 (4)_
Zm00001eb342080_P001 agpv5Zea mays086667780 (0)C
v1_GRMZM2G066101_P01 4a53Zea mays0757728411 (11)_
v1_GRMZM2G327032_P02 4a53Zea mays048374843 (3)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: AAA_16(1) AAA_3(2) AAA_5(1) MCM(1) MCM_lid(2) MCM_N(1) MCM_OB(1) Mg_chelatase(2)
TargetP: Chloroplast (Class 2 C0.981; M0.014; S0.001; _0.241)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 847 aa (-cTP 775)
Molecular Weight 93.66 kDA(-cTP 86.20)
PI 5.94(-cTP 5.74)

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2306Detail        [A. thaliana] Clp C1 TRAP

* For details about the exprimental sources click here.

Published Proteomics Data

18463617(suspension cells-phosphorylated proteins)
19995728(proplastid (Brassica napus))
20706207(cell cycle interactome (cell culture))
22060019(phosphoproteome - N-starved seedlings)
21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)
21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help