PPDB

The Plant Proteome Database

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AT2G16070.1   plastid division2

Lab Annot. Plastid Division 2 (PDV2) (gene model 1 & 2 different in N-terminus)
Mapman: 31.5.3* cell.plastid.division
Curated Location envelope-outer (Pubmed: 23198870 16998069 18431481 )
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G16070.3 11Arabidopsis thaliana3E-1662241001000 (0)M
AT2G16070.2 11Arabidopsis thaliana5E-1572141001007 (7)_
Os07g03130.1 7Oryza sativa3E-5322442610 (0)_
GRMZM2G145633_P01 3.21Zea mays1E-4223837560 (0)_
v1_GRMZM2G145633_P01 4a53Zea mays1E-4223837560 (0)_
Zm00001eb299190_P001 agpv5Zea mays1E-4223837560 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Caerin_1(2)
TargetP: Mitochondria (Class 3 C0.021; M0.870; S0.011; _0.405)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon: 1 TMs
TAT position:
Length 224 aa (-cTP 208)
Molecular Weight 24.77 kDA(-cTP )
PI 9.17(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
877Detail       leaf [A. thaliana] chloroplast stromawild-type
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
1525Detail       leaf [A. thaliana] chloroplast nucleoidwild-type (rep. 1)

* For details about the exprimental sources click here.

Published Proteomics Data

18463617(suspension cells-phosphorylated proteins)
19245862(nuclear phosphoproteins (seedlings & cell culture))
19525416(leaf (wt and clpr4-1 mutant))
19334764(plasma membrane (cell culture))
19376835(leaf phosphoproteins)
20061580(chloroplast envelope (inner+outer))
20733066(phosphoproteome-ABA-leaf)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help