PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT2G16005.1   MD-2-related lipid recognition domain-containing protein

Lab Annot.
Mapman: 35.1 not assigned.no ontology
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G44100.1 11Arabidopsis thaliana8E-231534557314 (251)S
AT3G11780.2 11Arabidopsis thaliana2E-111143251127 (97)S
AT3G11780.1 11Arabidopsis thaliana3E-101382850142 (112)S
Os03g57420.1 7Oryza sativa2E-1212137539 (9)S
Os07g06590.1 7Oryza sativa2E-11120355027 (27)S
Os07g06590.3 7Oryza sativa2E-1191395827 (27)S
Zm00001eb060070_P001 agpv5Zea mays9E-1313734540 (0)S
v1_GRMZM2G362693_P02 4a53Zea mays4E-07115364916 (16)_
Zm00001eb117430_P001 agpv5Zea mays5E-0711536490 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: E1_DerP2_DerF2(1)
TargetP: Secreted (Class 1 C0.008; M0.036; S0.967; _0.028)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 160 aa (-cTP 119)
Molecular Weight 17.23 kDA(-cTP )
PI 8.28(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

18436743(specific to roots)
21325567(root-proteome (wt & det3))
21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help