PPDB

PPDB	The Plant Proteome Database

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AT2G15980.1 Tetratricopeptide repeat (TPR)-like superfamily protein

Lab Annot.

Mapman: 35.1.5 not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G39710.1 11 Arabidopsis thaliana 2E-47 462 27 48 0 (0) M
AT4G26680.1 11 Arabidopsis thaliana 6E-44 437 26 45 0 (0) M
AT4G26680.2 11 Arabidopsis thaliana 6E-44 437 26 45 0 (0) M
Os12g21930.3 7 Oryza sativa 1E-78 450 35 54 0 (0) _
Os12g21930.2 7 Oryza sativa 1E-78 450 35 54 0 (0) _
Os12g21930.1 7 Oryza sativa 1E-78 450 35 54 0 (0) _
GRMZM2G396752_P02 3.21 Zea mays 1E-75 436 34 54 0 (0) _
v1_GRMZM2G396752_P02 4a53 Zea mays 1E-75 436 34 54 0 (0) _
Zm00001eb322070_P001 agpv5 Zea mays 1E-75 436 34 54 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	IIGP(1) NatB_MDM20(2) ParD_antitoxin(1) PPR(9) PPR_1(7) PPR_2(7) PPR_3(7) PPR_lo
TargetP:	Cytoplasm (Class 5 C0.474; M0.083; S0.002; _0.480)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	498 aa (-cTP 431)
Molecular Weight	56.12 kDA(-cTP )
PI	6.51(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data