PPDB

The Plant Proteome Database

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AT2G15970.1   cold regulated 413 plasma membrane 1

Lab Annot. COR413-PM1 (cold regulated 413 plasma membrane 1)
Mapman: 20.2.2 stress.abiotic.cold
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G15970.2 11Arabidopsis thaliana6E-10815410010016 (14)_
AT4G37220.1 11Arabidopsis thaliana1E-8319759760 (0)_
AT3G50830.1 11Arabidopsis thaliana1E-8219661770 (0)_
Os03g55850.1 7Oryza sativa3E-7518260780 (0)_
Os05g49170.1 7Oryza sativa3E-11148315010 (10)C
GRMZM2G040030_P01 3.21Zea mays2E-7518060810 (0)_
v1_GRMZM2G040030_P01 4a53Zea mays2E-7518060810 (0)_
v1_GRMZM2G052423_P01 4a53Zea mays1E-7317959790 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: WCOR413(1)
TargetP: Cytoplasm (Class 2 C0.016; M0.105; S0.138; _0.917)
Predotar:
Subcel. Location:
TM-HMM prediction: 5 TMs
Aramemnon: 6 TMs
TAT position:
Length 197 aa (-cTP 135)
Molecular Weight 21.60 kDA(-cTP )
PI 9.12(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
361Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
527Detail       leaf [A. thaliana] total leaf tissue wild-type (wt1)
1399Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1400Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 wild-type
1401Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1404Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 wild-type
1405Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. wild-type
1407Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. clpr2-1
1418Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 3)
1422Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 2)
1426Detail       leaf [A. thaliana] total leaf tissue prep1xprep2xt1xt2 (rep. 3)
1620Detail        [A. thaliana] m48
1745Detail        [A. thaliana] Col-0

* For details about the exprimental sources click here.

Published Proteomics Data

15539469(vacuole)
19525416(leaf (wt and clpr4-1 mutant))
21988472(vacuole (unfiltered data))

Comparative Proteomics Data


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