PPDB

PPDB	The Plant Proteome Database

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AT2G15820.1 endonuclease

Lab Annot.

OTP51 pentatricopeptide repeat (PPR) protein
Mapman: 27.6* RNA.pentatricopeptide (PPR) repeat-containing protein

Curated Location

plastid (Pubmed: 23198870 18557832 )

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G61990.1 11 Arabidopsis thaliana 2E-14 325 24 44 2 (2) M
AT5G02860.1 11 Arabidopsis thaliana 2E-13 393 23 40 0 (0) C
AT5G02860.5 11 Arabidopsis thaliana 2E-13 393 23 40 0 (0) C
Os02g47360.1 7 Oryza sativa 0 655 53 75 10 (10) C
Os05g04160.1 7 Oryza sativa 5E-15 341 24 43 0 (0) M
Os12g44170.1 7 Oryza sativa 4E-14 213 25 48 0 (0) M
v1_GRMZM2G325019_P01 4a53 Zea mays 0 645 53 75 20 (20) C
Zm00001eb251880_P001 agpv5 Zea mays 0 645 53 75 0 (0) C
GRMZM2G325019_P01 3.21 Zea mays 0 645 53 75 24 (24) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	LAGLIDADG_2(1) PPR(7) PPR_1(3) PPR_2(9) PPR_3(5) PPR_long(4) RPN7(3) TPR_8(3)
TargetP:	Chloroplast (Class 3 C0.744; M0.020; S0.005; _0.296)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	849 aa (-cTP 781)
Molecular Weight	97.40 kDA(-cTP 90.23)
PI	8.01(-cTP 7.33)

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data