PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT2G15430.1   DNA-directed RNA polymerase family protein

Lab Annot.
Mapman: 27.2 RNA.transcription
Curated Location
TAIR curated location: nucleolus & nucleus & cytoplasm15610358
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G15400.1 11Arabidopsis thaliana0319889410 (9)_
AT2G15430.2 11Arabidopsis thaliana3E-17023398990 (0)_
AT2G15430.3 11Arabidopsis thaliana9E-1702301001000 (0)_
Os09g02284.1 7Oryza sativa1E-17032871849 (9)M
Os03g18410.1 7Oryza sativa1E-3431333510 (0)_
Os02g49180.1 7Oryza sativa1E-116648750 (0)_
Zm00001eb095630_P001 agpv5Zea mays2E-16532771820 (0)_
GRMZM5G874167_P02 3.21Zea mays2E-16532771824 (4)_
v1_GRMZM2G402295_P01 4a53Zea mays2E-165327718224 (24)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: RNA_pol_A_bac(2) RNA_pol_L(1)
TargetP: Cytoplasm (Class 2 C0.043; M0.149; S0.032; _0.912)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 319 aa (-cTP 281)
Molecular Weight 35.46 kDA(-cTP )
PI 4.63(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
325Detail       BY2 cell suspension [Tobacco] cell wall enriched wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help