PPDB

PPDB	The Plant Proteome Database

Search PPDB by:

PPDB home page

AT2G15400.1 DNA-directed RNA polymerase family protein

Lab Annot.

RBP36B (RNA polymerase II 36 kDa polypeptide B); DNA binding / DNA-directed RNA polymerase
Mapman: 27.2 RNA.transcription

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT2G15430.1 11 Arabidopsis thaliana 0 319 88 94 4 (1) _
AT2G15400.2 11 Arabidopsis thaliana 3E-172 230 100 100 0 (0) _
AT2G15430.2 11 Arabidopsis thaliana 3E-149 233 85 93 0 (0) _
Os09g02284.1 7 Oryza sativa 2E-159 328 67 81 9 (9) M
Os03g18410.1 7 Oryza sativa 4E-35 312 33 49 0 (0) _
Os02g49180.1 7 Oryza sativa 4E-10 68 45 70 0 (0) _
Zm00001eb095630_P001 agpv5 Zea mays 8E-153 329 66 78 0 (0) _
GRMZM5G874167_P02 3.21 Zea mays 8E-153 329 66 78 5 (4) _
v1_GRMZM2G402295_P01 4a53 Zea mays 8E-153 329 66 78 24 (24) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	ATP-synt_DE_N(1) RNA_pol_A_bac(1) RNA_pol_L(1) RNA_pol_L_2(2)
TargetP:	Cytoplasm (Class 2 C0.068; M0.186; S0.023; _0.826)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	319 aa (-cTP 281)
Molecular Weight	35.58 kDA(-cTP )
PI	4.77(-cTP )

Experimental Evidence

Expand

* For details about the exprimental sources click here.

Published Proteomics Data

19525416(leaf (wt and clpr4-1 mutant))
21173025(root proteome)

Comparative Proteomics Data