PPDB

The Plant Proteome Database

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AT2G14835.2   RING/U-box superfamily protein

Lab Annot. zinc finger (C3HC4-type RING finger) protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G14835.1 11Arabidopsis thaliana03431001003 (3)S
Os10g20600.1 7Oryza sativa1E-13836254670 (0)S
Zm00001eb027340_P003 agpv5Zea mays3E-12836454670 (0)S
GRMZM2G046658_P01 3.21Zea mays3E-12836454670 (0)S
v1_GRMZM2G046658_P01 4a53Zea mays3E-12836454670 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Man-6-P_recep(1) zf-B_box(3)
TargetP: Secreted (Class 3 C0.002; M0.129; S0.851; _0.290)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon: 1 TMs
TAT position:
Length 343 aa (-cTP 340)
Molecular Weight 37.44 kDA(-cTP )
PI 8.44(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
1545Detail       leaf [A. thaliana] TiO2 thylakoid membranewt
1557Detail       leaf [A. thaliana] TiO2 thylakoid membranewt

* For details about the exprimental sources click here.

Published Proteomics Data

18463617(suspension cells-phosphorylated proteins)
19546170(mature pollen grains)
19245862(nuclear phosphoproteins (seedlings & cell culture))
19525416(leaf (wt and clpr4-1 mutant))
19334764(plasma membrane (cell culture))
19376835(leaf phosphoproteins)
20733066(ABA effected phosphoproteome)
20733066(phosphoproteome-ABA-leaf)
21173025(root proteome)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help