PPDB

 The Plant Proteome Database

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AT2G14750.1   APS kinase
Lab Annot. Adenosine-5'-phosphosulfate kinase 1 (APK1)
Mapman: 14.15 S-assimilation.AKN
Curated Location plastid stroma (Pubmed: 23198870 19304933 )

TAIR curated location: plastid11488606
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G39940.1 11Arabidopsis thaliana9E-11220174863 (0)C
AT3G03900.1 11Arabidopsis thaliana1E-11020672850 (0)_
AT3G03900.2 11Arabidopsis thaliana1E-11020672850 (0)_
Os11g41650.2 7Oryza sativa3E-10720571850 (0)C
Os07g38560.1 7Oryza sativa1E-10320568840 (0)C
Os03g10500.1 7Oryza sativa1E-8716776840 (0)M
GRMZM5G895554_P05 3.21Zea mays2E-11121670840 (0)C
v1_GRMZM2G109997_P06 4a53Zea mays2E-11121670840 (0)C
Zm00001eb400760_P002 agpv5Zea mays2E-11121670840 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: AAA_16(1) AAA_18(1) AAA_22(1) AAA_23(1) AAA_29(1) AAA_30(1) AAA_33(1) ABC_tran(1
TargetP: Chloroplast (Class 3 C0.735; M0.173; S0.094; _0.063)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 276 aa (-cTP 238)
Molecular Weight 29.79 kDA(-cTP 25.95)
PI 8.32(-cTP 7.02)

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
543Detail       leaf [A. thaliana] stroma (FPLC) >600 kDa (HMA) wild-type
1457Detail       leaf [A. thaliana] chloroplast stromawild-type (rep. 3)
1458Detail       leaf [A. thaliana] chloroplast stromaclps (rep. 1)
1459Detail       leaf [A. thaliana] chloroplast stromaclps (rep. 2)
1460Detail       leaf [A. thaliana] chloroplast stromaclps (rep. 3)
1462Detail       leaf [A. thaliana] chloroplast stromaclpc1 (rep. 2)
1484Detail       leaf [A. thaliana] chloroplast stromaclpc1 x clps (rep. 2)
1486Detail       leaf [A. thaliana] chloroplast stromaclpc1 x clps (rep. 3)
1637Detail       leaf [A. thaliana] total leaf tissue stromaWild-type
1942Detail       leaf [A. thaliana] stroma WT stromawild-type
1947Detail       leaf [A. thaliana] stroma ClpS stromaclpS
1949Detail       leaf [A. thaliana] stroma ClpS stromaclpS
2010Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1
2014Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1
2016Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1xopda1-2
2112Detail       leaf [A. thaliana] Stroma stromawt
2114Detail       leaf [A. thaliana] Stroma stromawt
2115Detail       leaf [A. thaliana] Stroma stromacGep
2297Detail        [A. thaliana] Clp C1 WT

* For details about the exprimental sources click here.

Published Proteomics Data

 19546170(mature pollen grains)
17216043(leaf)
21693672(wound-regulated leaf proteome (wt))
21173025(root proteome)

Comparative Proteomics Data

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