PPDB

The Plant Proteome Database

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AT2G13680.1   callose synthase 5

Lab Annot. synthesis of callose
Mapman: 3.6 minor CHO metabolism.callose
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G31960.3 11Arabidopsis thaliana0197259740 (0)_
AT1G05570.1 11Arabidopsis thaliana0195960752 (2)_
AT1G05570.4 11Arabidopsis thaliana0195960750 (0)_
Os06g51270.1 7Oryza sativa01333617616 (16)C
Os03g03610.2 7Oryza sativa0194058730 (0)M
Os03g03610.3 7Oryza sativa0194058730 (0)M
GRMZM2G326643_P04 3.21Zea mays01873466118 (18)M
v1_GRMZM2G326643_P04 4a53Zea mays0187346617 (6)M
GRMZM2G326643_P01 3.21Zea mays01944466218 (18)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: FKS1_dom1(1) Glucan_synthase(1) Vta1(1)
TargetP: Chloroplast (Class 5 C0.400; M0.289; S0.035; _0.317)
Predotar:
Subcel. Location: Transmembrane
TM-HMM prediction: 13 TMs
Aramemnon: 14 TMs
TAT position:
Length 1923 aa (-cTP 1874)
Molecular Weight 220.66 kDA(-cTP 215.51)
PI 9.10(-cTP 9.10)

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
352Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
1123Detail       leaf [A. thaliana] chloroplast plastoglobulewild-type
1410Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 1.2 wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

19546170(mature pollen grains)
20706207(contaminants cell cycle interactome (cell culture))

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help