PPDB

PPDB	The Plant Proteome Database

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AT2G13600.1 Pentatricopeptide repeat (PPR) superfamily protein

Lab Annot.

SLO2 (editing)
Mapman: 27 RNA; 27.1.5* RNA.processing.editing

Curated Location

mitochondria (Pubmed: 22540321 )

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT2G22070.1 11 Arabidopsis thaliana 2E-159 680 37 56 0 (0) _
AT1G25360.1 11 Arabidopsis thaliana 4E-153 688 36 56 0 (0) M
AT4G02750.1 11 Arabidopsis thaliana 8E-153 665 39 58 0 (0) M
Os04g35610.1 7 Oryza sativa 0 677 55 72 0 (0) M
Os03g56400.1 7 Oryza sativa 2E-155 692 36 56 0 (0) _
Os04g49520.1 7 Oryza sativa 5E-154 628 36 60 0 (0) M
GRMZM2G010046_P01 3.21 Zea mays 0 671 54 73 0 (0) M
Zm00001eb422810_P001 agpv5 Zea mays 0 671 54 73 0 (0) M
v1_GRMZM2G010046_P01 4a53 Zea mays 0 671 54 73 0 (0) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	ChAPs(3) Coatomer_E(3) DYW_deaminase(1) PPR(14) PPR_1(12) PPR_2(12) PPR_3(10) PP
TargetP:	Cytoplasm (Class 4 C0.202; M0.081; S0.312; _0.519)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	697 aa (-cTP 654)
Molecular Weight	78.09 kDA(-cTP )
PI	5.57(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data