PPDB

The Plant Proteome Database

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AT2G12400.1   plasma membrane fusion protein

Lab Annot.
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G25270.1 11Arabidopsis thaliana052551700 (0)S
AT1G80540.3 11Arabidopsis thaliana5E-14847447640 (0)M
AT1G80540.1 11Arabidopsis thaliana1E-14747447640 (0)M
Os02g55590.1 7Oryza sativa0497637712 (12)S
Os02g55590.2 7Oryza sativa042065805 (5)M
Os04g55110.1 7Oryza sativa049451680 (0)S
v1_GRMZM2G180422_P01 4a53Zea mays049662751 (1)S
Zm00001eb258050_P003 agpv5Zea mays049662750 (0)S
GRMZM2G180422_P01 3.21Zea mays049662753 (3)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF2207(3) FA_desaturase(3) Glycoprotein_G(1) HXXEE(2) Shisa(2) SUR7(3) Tetraspa
TargetP: Secreted (Class 2 C0.003; M0.167; S0.966; _0.008)
Predotar:
Subcel. Location:
TM-HMM prediction: 6 TMs
Aramemnon: 5 TMs
TAT position:
Length 541 aa (-cTP 517)
Molecular Weight 60.28 kDA(-cTP )
PI 7.44(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

19546170(mature pollen grains)
19334764(plasma membrane (cell culture))
21533090(plasmodesmata-crude)
21173025(root proteome)
21433285(Crude microsomes cell_cultures)
21433285(purified Plasma membrane -cell_cultures)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help