PPDB

PPDB	The Plant Proteome Database

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AT2G07727.1 cytochrome b

Lab Annot.

cytochrome b (MTCYB) (COB) (CYTB)
Mapman: 35.1 not assigned.no ontology

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
ATMG00220.1 11 Arabidopsis thaliana 0 393 100 100 8 (8) _
ATCG00720.1 11 Arabidopsis thaliana 2E-35 189 35 56 1576 (1560) _
ATMG00590.1 11 Arabidopsis thaliana 3E-21 47 91 95 0 (0) _
Osm1g00480.1 7 Oryza sativa 0 393 93 95 2 (2) _
Osp1g00640.1 7 Oryza sativa 2E-35 205 34 54 187 (187) _
Os04g16846.1 7 Oryza sativa 2E-35 205 34 54 63 (63) _
GRMZM2G112030_P01 3.21 Zea mays 0 388 94 95 13 (13) _
v1_GRMZM2G112030_P01 4a53 Zea mays 0 388 94 95 0 (0) _
Zm00001eb436400_P001 agpv5 Zea mays 0 388 94 95 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	CopD(1) Cytochrom_B_C(2) Cytochrom_B_N_2(1) Cytochrome_B(1) DUF973(1)
TargetP:	Cytoplasm (Class 4 C0.035; M0.330; S0.084; _0.630)
Predotar:
Subcel. Location:
TM-HMM prediction:	9 TMs
Aramemnon:	9 TMs
TAT position:
Length	393 aa (-cTP 377)
Molecular Weight	44.15 kDA(-cTP )
PI	6.77(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1345	Detail								leaf [A. thaliana]	total tissue (5 day HL)	wild-type (rep. 1)
1350	Detail								leaf [A. thaliana]	total tissue (5 day HL)	abck2xabck3 (rep. 3)
1418	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 3)
1439	Detail								leaf [A. thaliana]	total tissue (0 day HL)	wild-type (rep. 1)
2247	Detail								seedlings [A. thaliana]	total tissue	atg5
2268	Detail								seedlings [A. thaliana]	total tissue	wild-type
2269	Detail								seedlings [A. thaliana]	total tissue	wild-type
2271	Detail								seedlings [A. thaliana]	total tissue	wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

19546170(mature pollen grains)
19525416(leaf (wt and clpr4-1 mutant))
21311031(mitochondria)
21325567(root-proteome (wt & det3))
21841088(mitochondria (2DE native gel))
21173025(root proteome)

Comparative Proteomics Data