PPDB

PPDB	The Plant Proteome Database

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AT2G07560.1 H[+]-ATPase 6

Lab Annot.

Mapman: 34.1 transport.p- and v-ATPases

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G42640.1 11 Arabidopsis thaliana 0 950 87 94 9 (6) _
AT1G80660.1 11 Arabidopsis thaliana 0 949 83 91 39 (37) _
AT4G30190.1 11 Arabidopsis thaliana 0 947 82 90 200 (187) _
Os04g56160.1 7 Oryza sativa 0 947 82 91 74 (74) _
Os04g56160.3 7 Oryza sativa 0 908 82 91 8 (8) _
Os05g25550.1 7 Oryza sativa 0 972 78 87 1 (1) _
Zm00001eb432500_P001 agpv5 Zea mays 0 947 81 91 0 (0) _
GRMZM2G006894_P02 3.21 Zea mays 0 947 81 91 54 (53) _
v1_GRMZM2G006894_P02 4a53 Zea mays 0 947 81 91 65 (65) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Cation_ATPase(1) Cation_ATPase_N(1) E1-E2_ATPase(4) Hydrolase(1) Hydrolase_3(2)
TargetP:	Cytoplasm (Class 1 C0.081; M0.075; S0.017; _0.941)
Predotar:
Subcel. Location:
TM-HMM prediction:	9 TMs
Aramemnon:	10 TMs
TAT position:
Length	949 aa (-cTP 947)
Molecular Weight	105.01 kDA(-cTP )
PI	5.83(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1421	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (rep. 1)
1426	Detail								leaf [A. thaliana]	total leaf tissue	prep1xprep2xt1xt2 (rep. 3)

* For details about the exprimental sources click here.

Published Proteomics Data

17644812(plasma membrane - suspension cells)
17432890(leaf total membranes)
17660356(tonoplast (Brassica oleracea buds))
19452453(14-3-3-interacting proteins)
19200160(flower-stage 12)
19546170(mature pollen grains)
19106119(plasma membrane detergent resistent microdomains (DRM))
19334764(plasma membrane (cell culture))
21173025(root proteome)

Comparative Proteomics Data