PPDB

 The Plant Proteome Database

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AT2G07050.1   cycloartenol synthase 1
Lab Annot. cycloartenol synthase (CAS1)
Mapman: 17.3.1.2.99 hormone metabolism.brassinosteroid.synthesis-degradation.sterols.other
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G07050.2 11Arabidopsis thaliana06681001000 (0)_
AT3G45130.3 11Arabidopsis thaliana075365790 (0)_
AT3G45130.2 11Arabidopsis thaliana075365790 (0)_
Os02g04710.1 7Oryza sativa075574869 (9)M
Os02g04710.2 7Oryza sativa063377889 (9)S
Os11g08569.1 7Oryza sativa075564790 (0)M
Zm00001eb232070_P003 agpv5Zea mays075575860 (0)M
v1_GRMZM2G023798_P01 4a53Zea mays075575860 (0)M
GRMZM2G023798_P01 3.21Zea mays075575860 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Pec_lyase(5) Prenyltrans(7) SQHop_cyclase_C(2) SQHop_cyclase_N(5) TED_complement
TargetP: Cytoplasm (Class 5 C0.064; M0.509; S0.019; _0.552)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon: 2 TMs
TAT position:
Length 759 aa (-cTP 754)
Molecular Weight 86.03 kDA(-cTP )
PI 5.72(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
361Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
527Detail       leaf [A. thaliana] total leaf tissue wild-type (wt1)
1126Detail       leaf [A. thaliana] chloroplast plastoglobulek2k3
1408Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. clpr2-1
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
1421Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 1)
1422Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 2)
1423Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 3)
1529Detail       leaf [A. thaliana] total leaf tissue - 0 uM CAP wild-type (rep. 1)
1531Detail       leaf [A. thaliana] total leaf tissue - 40 uM CAP wild-type (rep. 1)
1533Detail       leaf [A. thaliana] total leaf tissue - 30 uM CAP clps (rep. 1)
1618Detail        [A. thaliana] m48
1620Detail        [A. thaliana] m48
1622Detail        [A. thaliana] m48
1829Detail       leaf [A. thaliana] Thylakoids thylakoid membraneMet1-1 Fluctuating light
2016Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1xopda1-2
2246Detail       seedlings [A. thaliana] total tissue gfs9
2247Detail       seedlings [A. thaliana] total tissue atg5
2253Detail       seedlings [A. thaliana] total tissue atg5
2270Detail       seedlings [A. thaliana] total tissue wild-type
2271Detail       seedlings [A. thaliana] total tissue wild-type
2303Detail        [A. thaliana] Clp C1 WT
2307Detail        [A. thaliana] Clp C1 TRAP
2320Detail        [A. thaliana] Thylakoids plastoglobule 
2321Detail       leaf [A. thaliana]  
2324Detail       leaf [A. thaliana] THYLAKOIDS thylakoid membrane 
2325Detail       leaf [A. thaliana] thylakoids thylakoid membraneabc1k6

* For details about the exprimental sources click here.

Published Proteomics Data

 15215502(Vacuolar proteome)
15539469(vacuole)
19546170(mature pollen grains)
19525416(leaf (wt and clpr4-1 mutant))
19334764(plasma membrane (cell culture))
19114538(guard cells Arabidopsis leaf)
21173025(root proteome)
21988472(vacuole (unfiltered data))
21433285(Crude microsomes cell_cultures)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help