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AT2G06530.1 SNF7 family protein

Lab Annot.

VPS2.1
Mapman: 27.3.71 RNA.regulation of transcription.SNF7

Curated Location

not plastid (supported by in-house exprements)

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT2G06530.2 11 Arabidopsis thaliana 4E-145 204 100 100 0 (0) _
AT1G03950.1 11 Arabidopsis thaliana 6E-55 220 44 65 0 (0) _
AT5G44560.1 11 Arabidopsis thaliana 6E-51 224 41 63 0 (0) _
Os07g13270.1 7 Oryza sativa 2E-117 225 82 90 0 (0) M
Os11g47710.1 7 Oryza sativa 3E-114 224 82 86 0 (0) _
Os07g13270.2 7 Oryza sativa 2E-76 164 80 89 0 (0) M
GRMZM2G431900_P01 3.21 Zea mays 6E-127 224 84 92 1 (1) _
v1_GRMZM2G431900_P01 4a53 Zea mays 6E-127 224 84 92 1 (1) _
Zm00001eb303830_P001 agpv5 Zea mays 6E-127 224 84 92 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Cas9_Topo(2) DUF2203(2) Expansin_C(1) HTH_6(1) MRP-L28(1) PspA_IM30(2) Seryl_tRN
TargetP:	Cytoplasm (Class 3 C0.020; M0.379; S0.047; _0.842)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	225 aa (-cTP 213)
Molecular Weight	25.29 kDA(-cTP )
PI	5.54(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1418	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 3)
1431	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	wild-type (rep. 2)
2009	Detail								leaf [A. thaliana]	total leaf tissue	wild-type
2010	Detail								leaf [A. thaliana]	total leaf tissue	prep1-1xprep2-1
2011	Detail								leaf [A. thaliana]	total leaf tissue	opda1-2

* For details about the exprimental sources click here.

Published Proteomics Data

16400686(floem_sap B. napa)
19546170(mature pollen grains)
19525416(leaf (wt and clpr4-1 mutant))
19106119(plasma membrane detergent resistent microdomains (DRM))
22010978(Endosomal-sorting-interactome-VPS2.2)
21173025(root proteome)

Comparative Proteomics Data