PPDB

PPDB	The Plant Proteome Database

Search PPDB by:

PPDB home page

AT2G06210.1 binding protein

Lab Annot.

ELF8 (EARLY FLOWERING 8); binding
Mapman: 35.1 not assigned.no ontology

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G04240.1 11 Arabidopsis thaliana 7E-07 398 21 39 0 (0) C
Os07g29360.1 7 Oryza sativa 0 1082 61 77 17 (17) _
Os02g43920.1 7 Oryza sativa 1E-07 240 22 44 0 (0) M
Os01g68680.1 7 Oryza sativa 6E-07 398 22 39 0 (0) M
GRMZM2G161913_P03 3.21 Zea mays 0 892 59 76 4 (2) _
v1_GRMZM2G161913_P01 4a53 Zea mays 0 1080 61 76 11 (11) _
Zm00001eb073540_P001 agpv5 Zea mays 0 1080 61 76 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	ANAPC3(5) CBP_BcsQ(2) Fis1_TPR_C(4) NARP1(3) PPTA(2) TPR_1(14) TPR_10(8) TPR_11(
TargetP:	Cytoplasm (Class 2 C0.118; M0.080; S0.144; _0.778)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	1091 aa (-cTP 1083)
Molecular Weight	124.03 kDA(-cTP )
PI	5.20(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1417	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 2)
2236	Detail								seedlings [A. thaliana]	total tissue	gfs9
2254	Detail								leaf [A. thaliana]	total seedlings	gfs9
2255	Detail								leaf [A. thaliana]	total seedlings	gfs9
2256	Detail								leaf [A. thaliana]	total seedlings	gfs9
2257	Detail								leaf [A. thaliana]	total seedlings	gfs9
2258	Detail								leaf [A. thaliana]	total seedlings	gfs9
2259	Detail								leaf [A. thaliana]	total seedlings	gfs9
2324	Detail								leaf [A. thaliana]	THYLAKOIDS thylakoid membrane

* For details about the exprimental sources click here.

Published Proteomics Data

17432890(leaf total membranes)
19525416(leaf (wt and clpr4-1 mutant))
20706207(cell cycle interactome (cell culture))
19114538(guard cells Arabidopsis leaf)
21533090(plasmodesmata-crude)

Comparative Proteomics Data