PPDB

PPDB	The Plant Proteome Database

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AT2G06005.1 FRIGIDA interacting protein 1

Lab Annot.

Mapman: 35.2 not assigned.unknown

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT2G06005.6 11 Arabidopsis thaliana 0 302 98 99 0 (0) _
AT2G06005.4 11 Arabidopsis thaliana 0 302 98 99 0 (0) _
AT2G06005.2 11 Arabidopsis thaliana 0 295 100 100 0 (0) S
Os02g53780.1 7 Oryza sativa 2E-158 340 62 81 0 (0) _
Os02g53780.2 7 Oryza sativa 8E-156 334 63 81 0 (0) _
Zm00001eb256890_P002 agpv5 Zea mays 5E-151 330 62 80 0 (0) _
Zm00001eb256890_P001 agpv5 Zea mays 5E-151 330 62 80 0 (0) _
GRMZM2G151237_P01 3.21 Zea mays 5E-151 330 62 80 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DUF3754(2) DUF4201(2) Exonuc_VII_L(1) FOXP-CC(2) Lebercilin(1) TMEM192(1) Uso1_p
TargetP:	Cytoplasm (Class 1 C0.025; M0.059; S0.052; _0.974)
Predotar:
Subcel. Location:
TM-HMM prediction:	4 TMs
Aramemnon:	4 TMs
TAT position:
Length	355 aa (-cTP 353)
Molecular Weight	40.59 kDA(-cTP )
PI	6.47(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data