PPDB

PPDB	The Plant Proteome Database

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AT2G06000.1 Pentatricopeptide repeat (PPR) superfamily protein

Lab Annot.

Pentatricopeptide repeat (PPR) protein
Mapman: 27.6* RNA.pentatricopeptide (PPR) repeat-containing protein

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT2G06000.2 11 Arabidopsis thaliana 0 536 100 100 0 (0) _
AT1G09900.1 11 Arabidopsis thaliana 8E-72 421 31 53 2 (2) _
AT5G16640.1 11 Arabidopsis thaliana 5E-68 426 31 53 0 (0) M
Os04g36840.1 7 Oryza sativa 1E-127 413 46 67 0 (0) C
Os03g06910.1 7 Oryza sativa 2E-71 409 32 53 0 (0) M
Os06g05920.1 7 Oryza sativa 3E-70 411 33 54 0 (0) C
GRMZM2G021319_P01 3.21 Zea mays 1E-126 423 45 65 0 (0) M
v1_GRMZM2G021319_P01 4a53 Zea mays 1E-126 423 45 65 0 (0) M
GRMZM2G092762_P01 3.21 Zea mays 6E-126 386 48 67 0 (0) S
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	ATP13(4) Cys_knot(2) FluMu_N(4) Hpr_kinase_C(1) MRP-S27(4) PPR(11) PPR_1(12) PPR
TargetP:	Cytoplasm (Class 5 C0.176; M0.254; S0.054; _0.378)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	536 aa (-cTP 491)
Molecular Weight	59.77 kDA(-cTP )
PI	8.59(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data