PPDB

PPDB	The Plant Proteome Database

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AT2G05642.1 Nucleic acid-binding%2C OB-fold-like protein

Lab Annot.

Mapman: 28.1 DNA.synthesis/chromatin structure

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G60920.2 11 Arabidopsis thaliana 2E-52 108 93 97 0 (0) S
AT3G60920.1 11 Arabidopsis thaliana 2E-52 108 93 97 0 (0) _
AT1G52950.1 11 Arabidopsis thaliana 2E-32 440 25 45 0 (0) _
Os07g09300.1 6 Oryza sativa 5E-26 578 21 39 0 (0) _
Os11g28660.1 7 Oryza sativa 4E-16 558 22 40 0 (0) _
Os07g02230.1 7 Oryza sativa 1E-13 560 21 38 0 (0) _
Zm00001eb179900_P001 agpv5 Zea mays 2E-14 430 23 40 0 (0) _
v1_GRMZM2G447847_P01 4a53 Zea mays 1E-13 415 22 39 0 (0) _
GRMZM2G447847_P01 3.21 Zea mays 1E-13 415 22 39 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DUF223(1) DUF4503(1) Rep_fac-A_C(2) REPA_OB_2(3) tRNA_anti-codon(2)
TargetP:	Cytoplasm (Class 3 C0.123; M0.276; S0.059; _0.679)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	532 aa (-cTP 509)
Molecular Weight	60.23 kDA(-cTP )
PI	7.92(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data