PPDB

The Plant Proteome Database

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AT2G05630.2   Ubiquitin-like superfamily protein

Lab Annot. ATG8d - (ATG8/12 conjugation pathway)
Mapman: 29.5.2 protein.degradation.autophagy
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links PeptideAtlas   POGS   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G05630.1 11Arabidopsis thaliana4E-7516472730 (0)_
AT1G62040.1 11Arabidopsis thaliana2E-6410785970 (0)_
AT4G21980.1 11Arabidopsis thaliana1E-6310684941 (1)_
Os08g09240.2 7Oryza sativa7E-6710887970 (0)_
Os08g09240.1 7Oryza sativa7E-6710887970 (0)_
Os04g53240.1 7Oryza sativa1E-6610986960 (0)_
Zm00001eb413320_P007 agpv5Zea mays1E-6611086950 (0)_
Zm00001eb413320_P004 agpv5Zea mays1E-6611086950 (0)_
GRMZM2G134613_P02 3.21Zea mays3E-66108879618 (17)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: APG12(1) Atg8(1)
TargetP: Cytoplasm (Class 4 C0.178; M0.053; S0.284; _0.558)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 164 aa (-cTP 135)
Molecular Weight 18.86 kDA(-cTP )
PI 8.93(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help