PPDB

The Plant Proteome Database

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AT2G05380.1   glycine-rich protein 3 short isoform

Lab Annot.
Mapman: 35.1.40 not assigned.no ontology.glycine rich proteins
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G05380.3 11Arabidopsis thaliana7E-751161001000 (0)S
AT2G05380.2 11Arabidopsis thaliana3E-2911685851 (0)S
AT2G05520.6 11Arabidopsis thaliana3E-2811861673 (3)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: GRP(1)
TargetP: Secreted (Class 1 C0.008; M0.019; S0.997; _0.051)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon:
TAT position:
Length 116 aa (-cTP 97)
Molecular Weight 11.59 kDA(-cTP )
PI 8.24(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1336Detail       leaf [A. thaliana] total tissue - low mass region t1-t2

* For details about the exprimental sources click here.

Published Proteomics Data

19200160(flower-stage 12)
19329564(peroxisomes (leaf))
20166762(whole leaf)
21189294(nuclear pore complex (co-IPs RAE1,Nup43,50a,93a,136))

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help