PPDB

The Plant Proteome Database

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AT2G05160.1   CCCH-type zinc fingerfamily protein with RNA-binding domain-containing protein

Lab Annot. CCCH-type zinc fingerprotein with RNA-binding domain
Mapman: 27.3.99 RNA.regulation of transcription.unclassified
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G05160.2 11Arabidopsis thaliana05361001000 (0)_
AT2G05160.3 11Arabidopsis thaliana047199990 (0)_
AT3G52980.1 11Arabidopsis thaliana038374820 (0)_
Os08g03310.4 7Oryza sativa3E-9140044610 (0)_
Os08g03310.3 7Oryza sativa3E-9140044610 (0)_
Os08g03310.5 7Oryza sativa4E-9140044610 (0)_
v1_GRMZM2G148090_P02 4a53Zea mays8E-8043039550 (0)_
GRMZM2G148090_P02 3.21Zea mays8E-8043039550 (0)_
v1_GRMZM2G148090_P01 4a53Zea mays1E-7741239550 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: OST-HTH(1) RRM_1(1) Torus(1) zf-CCCH(1) zf-CCCH_2(1) zf-CCCH_4(1) zf_CCCH_4(1)
TargetP: Cytoplasm (Class 2 C0.057; M0.049; S0.068; _0.805)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 536 aa (-cTP 531)
Molecular Weight 61.35 kDA(-cTP )
PI 6.56(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


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