PPDB

PPDB	The Plant Proteome Database

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AT2G05160.1 CCCH-type zinc fingerfamily protein with RNA-binding domain-containing protein

Lab Annot.

CCCH-type zinc fingerprotein with RNA-binding domain
Mapman: 27.3.99 RNA.regulation of transcription.unclassified

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT2G05160.2 11 Arabidopsis thaliana 0 536 100 100 0 (0) _
AT2G05160.3 11 Arabidopsis thaliana 0 471 99 99 0 (0) _
AT3G52980.1 11 Arabidopsis thaliana 0 383 74 82 0 (0) _
Os08g03310.4 7 Oryza sativa 3E-91 400 44 61 0 (0) _
Os08g03310.3 7 Oryza sativa 3E-91 400 44 61 0 (0) _
Os08g03310.5 7 Oryza sativa 4E-91 400 44 61 0 (0) _
v1_GRMZM2G148090_P02 4a53 Zea mays 8E-80 430 39 55 0 (0) _
GRMZM2G148090_P02 3.21 Zea mays 8E-80 430 39 55 0 (0) _
v1_GRMZM2G148090_P01 4a53 Zea mays 1E-77 412 39 55 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	OST-HTH(1) RRM_1(1) Torus(1) zf-CCCH(1) zf-CCCH_2(1) zf-CCCH_4(1) zf_CCCH_4(1)
TargetP:	Cytoplasm (Class 2 C0.057; M0.049; S0.068; _0.805)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	536 aa (-cTP 531)
Molecular Weight	61.35 kDA(-cTP )
PI	6.56(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data