PPDB

The Plant Proteome Database

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AT2G05120.1   Nucleoporin%2C Nup133/Nup155-like protein

Lab Annot. Nucleoporin Nup133
Mapman: 29.3.1 protein.targeting.nucleus
Curated Location nucleus (Pubmed: 21189294 )
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G05120.2 11Arabidopsis thaliana0975949411 (9)C
Os03g12450.1 7Oryza sativa097653709 (9)C
Zm00001eb399630_P002 agpv5Zea mays097353700 (0)C
Zm00001eb399630_P001 agpv5Zea mays097153700 (0)C
GRMZM2G058374_P01 3.21Zea mays058951699 (9)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Ins134_P3_kin_N(1) Nucleoporin_C(4) Nucleoporin_N(1)
TargetP: Cytoplasm (Class 2 C0.056; M0.080; S0.125; _0.886)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon: 1 TMs
TAT position:
Length 975 aa (-cTP 890)
Molecular Weight 110.84 kDA(-cTP )
PI 5.09(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
1421Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 1)
1507Detail        [A. thaliana] wild-type
2290Detail        [A. thaliana] Clp C1 TRAP
2320Detail        [A. thaliana] Thylakoids plastoglobule 
2321Detail       leaf [A. thaliana]  
2325Detail       leaf [A. thaliana] thylakoids thylakoid membraneabc1k6

* For details about the exprimental sources click here.

Published Proteomics Data

15028209(Total chloroplast)
19525416(leaf (wt and clpr4-1 mutant))
19995723(chloroplast reference proteome)
20733066(phosphoproteome-ABA-leaf)
21768351(Leaf-Phosphoproteome)
21189294(nuclear pore complex (co-IPs RAE1,Nup43,50a,93a,136))
21433285(Crude microsomes cell_cultures)

Comparative Proteomics Data


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