PPDB

The Plant Proteome Database

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AT2G04940.1   scramblase-like protein

Lab Annot. scramblase-related
Mapman: 35.1 not assigned.no ontology
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
Os04g51080.1 7Oryza sativa2E-11831356711 (1)M
Os02g14290.1 7Oryza sativa3E-10620869820 (0)_
Os02g14290.2 7Oryza sativa2E-10219970830 (0)_
GRMZM2G109753_P01 3.21Zea mays4E-12731258716 (6)M
Zm00001eb430250_P001 agpv5Zea mays4E-12731258710 (0)M
v1_GRMZM2G539821_P01 4a53Zea mays1E-7235242500 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Scramblase(2)
TargetP: Mitochondria (Class 3 C0.037; M0.562; S0.014; _0.053)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 392 aa (-cTP 318)
Molecular Weight 44.12 kDA(-cTP )
PI 8.86(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)

* For details about the exprimental sources click here.

Published Proteomics Data

16618929(MITO/PLASTID-LOPIT-callus)
19546170(mature pollen grains)
19525416(leaf (wt and clpr4-1 mutant))
19334764(plasma membrane (cell culture))
21841088(mitochondria (2DE native gel))

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help