PPDB

PPDB	The Plant Proteome Database

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AT2G04860.1 Tetratricopeptide repeat (TPR)-like superfamily protein

Lab Annot.

pentatricopeptide repeat (PPR) protein
Mapman: 27.6* RNA.pentatricopeptide (PPR) repeat-containing protein

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G18485.1 11 Arabidopsis thaliana 1E-125 685 33 55 1 (1) C
AT4G21300.1 11 Arabidopsis thaliana 5E-122 684 32 54 0 (0) C
AT4G39530.1 11 Arabidopsis thaliana 4E-118 682 31 51 0 (0) M
Os08g25280.1 7 Oryza sativa 3E-119 667 34 52 0 (0) M
Os03g56850.1 7 Oryza sativa 4E-118 619 34 54 0 (0) M
Os11g45410.1 7 Oryza sativa 1E-112 617 34 52 0 (0) _
Zm00001eb213580_P002 agpv5 Zea mays 2E-123 608 35 56 0 (0) _
Zm00001eb213580_P001 agpv5 Zea mays 3E-123 608 35 56 0 (0) _
GRMZM5G892151_P01 3.21 Zea mays 6E-122 608 35 56 0 (0) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	BTAD(6) PPR(14) PPR_1(10) PPR_2(12) PPR_3(10) PPR_long(3) RPN7(4)
TargetP:	Cytoplasm (Class 5 C0.107; M0.229; S0.065; _0.339)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	692 aa (-cTP 624)
Molecular Weight	76.65 kDA(-cTP )
PI	6.77(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data