PPDB

 The Plant Proteome Database

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AT2G04850.1   Auxin-responsive family protein
Lab Annot.
Mapman: 17.2.3 hormone metabolism.auxin.induced-regulated-responsive-activated
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G25290.1 11Arabidopsis thaliana7E-7239432530 (0)S
AT3G25290.2 11Arabidopsis thaliana7E-7239432530 (0)S
AT4G12980.1 11Arabidopsis thaliana9E-6739532521 (1)S
Os03g09850.1 7Oryza sativa4E-15838160762 (2)S
Os03g09900.1 7Oryza sativa4E-7335637550 (0)S
Os08g41280.1 7Oryza sativa3E-64366345326 (26)S
v1_GRMZM2G331638_P01 4a53Zea mays1E-15538359756 (6)S
GRMZM2G331638_P01 3.21Zea mays1E-15538359755 (5)S
Zm00001eb008250_P001 agpv5Zea mays1E-15538359750 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Cytochrom_B561(1) DUF2427(3) DUF2754(2) DUF3325(2) DUF568(1)
TargetP: Secreted (Class 3 C0.053; M0.036; S0.657; _0.150)
Predotar:
Subcel. Location:
TM-HMM prediction: 5 TMs
Aramemnon: 6 TMs
TAT position:
Length 404 aa (-cTP 391)
Molecular Weight 43.88 kDA(-cTP )
PI 9.65(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help