PPDB

 The Plant Proteome Database

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AT2G04360.1   transmembrane protein
Lab Annot. unknown protein
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G04360.2 11Arabidopsis thaliana036188880 (0)C
AT2G04360.3 11Arabidopsis thaliana026396980 (0)C
AT2G04360.4 11Arabidopsis thaliana4E-1492071001000 (0)_
Os08g25700.1 7Oryza sativa4E-9721265798 (8)C
Zm00001eb176810_P001 agpv5Zea mays1E-9426456690 (0)C
v1_GRMZM2G091245_P01 4a53Zea mays1E-9426456690 (0)C
GRMZM2G091245_P01 3.21Zea mays1E-94264566918 (18)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: PLDc_N(4) SNARE_assoc(2)
TargetP: Chloroplast (Class 2 C0.933; M0.223; S0.015; _0.006)
Predotar:
Subcel. Location: Transmembrane
TM-HMM prediction: 6 TMs
Aramemnon: 6 TMs
TAT position:
Length 320 aa (-cTP 279)
Molecular Weight 36.13 kDA(-cTP 31.59)
PI 8.56(-cTP 5.95)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

 21515685(GreenCut2)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help