PPDB

PPDB	The Plant Proteome Database

Search PPDB by:

PPDB home page

AT2G04280.1 calcium ion-binding protein

Lab Annot.

Mapman: 35.2 not assigned.unknown

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT4G12700.1 11 Arabidopsis thaliana 0 570 81 89 0 (0) M
AT4G08810.1 11 Arabidopsis thaliana 5E-174 555 46 65 0 (0) _
AT2G41150.2 11 Arabidopsis thaliana 1E-17 261 25 45 0 (0) S
Os10g31810.1 7 Oryza sativa 0 613 53 69 6 (6) M
Os07g43990.1 7 Oryza sativa 3E-164 554 46 65 17 (17) _
Os01g59070.1 7 Oryza sativa 5E-120 461 41 58 0 (0) S
Zm00001eb046840_P003 agpv5 Zea mays 0 647 51 67 0 (0) M
Zm00001eb046840_P001 agpv5 Zea mays 0 647 51 67 0 (0) M
Zm00001eb046840_P002 agpv5 Zea mays 0 647 51 67 0 (0) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	O-FucT(1)
TargetP:	Mitochondria (Class 4 C0.011; M0.838; S0.053; _0.523)
Predotar:
Subcel. Location:
TM-HMM prediction:	1 TMs
Aramemnon:	1 TMs
TAT position:
Length	568 aa (-cTP 555)
Molecular Weight	64.56 kDA(-cTP )
PI	5.65(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

16618929(UNKNOWN-LOPIT-callus)
19334764(plasma membrane (cell culture))
19114538(guard cells Arabidopsis leaf)
21173025(root proteome)
22430844(Golgi-cell-culture)
21433285(Crude microsomes cell_cultures)
21433285(purified Plasma membrane -cell_cultures)

Comparative Proteomics Data