PPDB

PPDB	The Plant Proteome Database

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AT2G04240.1 RING/U-box superfamily protein

Lab Annot.

RING/U-box protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT2G04240.2 11 Arabidopsis thaliana 2E-116 162 100 100 0 (0) C
AT3G61460.1 11 Arabidopsis thaliana 3E-19 158 29 47 0 (0) S
AT1G67856.1 11 Arabidopsis thaliana 3E-16 154 33 53 0 (0) C
Os08g38460.1 7 Oryza sativa 1E-24 149 34 58 0 (0) _
Os09g30160.1 7 Oryza sativa 4E-24 150 33 53 0 (0) S
Os02g45710.1 7 Oryza sativa 3E-12 87 36 54 0 (0) S
Zm00001eb101500_P001 agpv5 Zea mays 3E-23 167 31 49 0 (0) _
GRMZM2G018070_P01 3.21 Zea mays 3E-23 167 31 49 0 (0) _
v1_GRMZM2G018070_P01 4a53 Zea mays 3E-23 167 31 49 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DUF3446(1) FANCL_C(1) Prok-RING_1(2) Prok-RING_4(2) RINGv(2) RNF220(1) zf-ANAPC1
TargetP:	Chloroplast (Class 5 C0.265; M0.048; S0.060; _0.137)
Predotar:
Subcel. Location:	Stroma
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	162 aa (-cTP 107)
Molecular Weight	17.93 kDA(-cTP 12.50)
PI	6.28(-cTP 5.89)

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data