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AT2G03820.1
nonsense-mediated mRNA decay NMD3 family protein
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| Lab Annot. |
nonsense-mediated mRNA decay NMD3 protein
Mapman: 35.1 not assigned.no ontology |
| Curated Location |
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| Species |
Arabidopsis thaliana
Source:
TAIR Arabidopsis (v.11) |
| Links |
TAIR PeptideAtlas POGS SUBA Uniprot PTM
Get sequence
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Related Genes
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#Spots: The number of publicly accessible spots are in parenthesis
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| Prediction |
| PFAM: |
NMD3(1) |
| TargetP: |
Cytoplasm (Class 4 C0.073; M0.222; S0.268; _0.602) |
| Predotar: |
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| Subcel. Location: |
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| TM-HMM prediction: |
No |
| Aramemnon: |
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| TAT position: |
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| Length |
516 aa (-cTP 488) |
| Molecular Weight |
59.29 kDA(-cTP ) |
| PI |
5.56(-cTP ) |
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Experimental Evidence
Expand
View Identified Peptides
View GeneModel
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| Expr* | Spot | MW native | MW denatured | pI native | pI denatured | Type | Mowse | Ambiguity | Tissue | Sample from | Genotype |
| 1421 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | wild-type (rep. 1) |
| 1422 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | wild-type (rep. 2) |
| 1431 | Detail | | | | | | | | leaf [A. thaliana] | total tissue (2% sucrose) | wild-type (rep. 2) |
| 1440 | Detail | | | | | | | | leaf [A. thaliana] | total tissue (0 day HL) | wild-type (rep. 2) |
| 1535 | Detail | | | | | | | | leaf [A. thaliana] | | wild-type |
| 1577 | Detail | | | | | | | | leaf [A. thaliana] | TiO2 thylakoid membrane | WT |
| 1756 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | Col_0 |
| 1758 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | DXS_Flag+fosmidomycin |
| 1931 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | DXS_Flag |
| 2046 | Detail | | | | | | | | Total leaf [A. thaliana] | total soluble | wt and prep1-1xprep2-1xoop |
| 2074 | Detail | | | | | | | | Total leaf [A. thaliana] | total soluble | wt & prep1xprep2xclpt1xclpt2* |
| 2080 | Detail | | | | | | | | Total leaf [A. thaliana] | total soluble | wt & clpt1xclpt2 |
| 2082 | Detail | | | | | | | | Total leaf [A. thaliana] | total soluble | wt & clpt1xclpt2 |
| 2084 | Detail | | | | | | | | Total leaf [A. thaliana] | total soluble | wt & clpt1xclpt2 |
| 2147 | Detail | | | | | | | | Total leaf [A. thaliana] | total soluble stroma | wt & cgep |
| 2148 | Detail | | | | | | | | Total leaf [A. thaliana] | total soluble stroma | wt & cgep |
| 2152 | Detail | | | | | | | | Total leaf [A. thaliana] | total soluble stroma | wt & cgep |
| 2237 | Detail | | | | | | | | seedlings [A. thaliana] | total tissue | gfs9 |
| 2255 | Detail | | | | | | | | leaf [A. thaliana] | total seedlings | gfs9 |
| 2296 | Detail | | | | | | | | [A. thaliana] | | Clp C1 WT |
* For details about the exprimental sources
click here.
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Published Proteomics Data
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18931141(peroxisomes- high&low purity (cell culture))
19525416(leaf (wt and clpr4-1 mutant))
19334764(plasma membrane (cell culture))
20706207(cell cycle interactome (cell culture))
19114538(guard cells Arabidopsis leaf)
21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)
21173025(root proteome)
21988472(vacuole (unfiltered data))
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Comparative Proteomics Data
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